Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx9Q9WUH2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx9Q9WUH2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm18489-201ENSMUST00000172565 551 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx9Q9WUH2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx9Q9WUH2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms