Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm4518-201ENSMUST00000182638 718 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col13a1Q9R1N9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Gm45747-201ENSMUST00000212203 999 ntBASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms