Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.28■□□□□ 0.36
Hmgn5Q9JL35 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hmgn5Q9JL35 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn5Q9JL35 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn5Q9JL35 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Gm10653-202ENSMUST00000139570 835 ntBASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms