Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Gm6576-201ENSMUST00000169678 883 ntBASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm21956-201ENSMUST00000179946 522 ntBASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Mir6349-201ENSMUST00000184059 97 ntBASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm27454-201ENSMUST00000185090 204 ntBASIC12.35□□□□□ -0.43
Smco4Q9JIS3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.35□□□□□ -0.43
Smco4Q9JIS3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.35□□□□□ -0.43
Smco4Q9JIS3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms