Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm27742-201ENSMUST00000184667 60 ntBASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim39Q9ESN2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim39Q9ESN2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Olfr129-201ENSMUST00000122318 993 ntBASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trim39Q9ESN2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim39Q9ESN2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms