Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Gm18958-201ENSMUST00000174258 762 ntBASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Gm27463-201ENSMUST00000183569 57 ntBASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ube4bQ9ES00 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ube4bQ9ES00 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ube4bQ9ES00 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4bQ9ES00 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.75□□□□□ -0.05
Ube4bQ9ES00 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms