Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ap3s1Q9DCR2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Gm11336-201ENSMUST00000118168 334 ntBASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ap3s1Q9DCR2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ap3s1Q9DCR2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ap3s1Q9DCR2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms