Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Mir5122-201ENSMUST00000175004 89 ntBASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgn3Q9DCB1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Mir6404-201ENSMUST00000183699 94 ntBASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hmgn3Q9DCB1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms