Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShpkQ9D5J6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gm12085-201ENSMUST00000119263 940 ntBASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShpkQ9D5J6 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ShpkQ9D5J6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ShpkQ9D5J6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ShpkQ9D5J6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms