Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Gm13616-201ENSMUST00000120600 222 ntBASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Gm18889-201ENSMUST00000174284 929 ntBASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Mir6956-201ENSMUST00000183598 62 ntBASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.22■□□□□ 0.51
Stag1Q9D3E6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 App-207ENSMUST00000227737 2827 ntBASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stag1Q9D3E6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm43474-201ENSMUST00000196415 774 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Gm10154-201ENSMUST00000084445 354 ntBASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stag1Q9D3E6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stag1Q9D3E6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms