Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.56□□□□□ -0.08
Upk1aQ9D132 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Carlr-201ENSMUST00000181515 2574 ntBASIC14.56□□□□□ -0.08
Upk1aQ9D132 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gm5587-201ENSMUST00000206270 674 ntBASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.55□□□□□ -0.08
Upk1aQ9D132 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.55□□□□□ -0.08
Upk1aQ9D132 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.55□□□□□ -0.08
Upk1aQ9D132 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.55□□□□□ -0.08
Upk1aQ9D132 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk1aQ9D132 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk1aQ9D132 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.53□□□□□ -0.08
Upk1aQ9D132 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.53□□□□□ -0.08
Upk1aQ9D132 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk1aQ9D132 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk1aQ9D132 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk1aQ9D132 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk1aQ9D132 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk1aQ9D132 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.52□□□□□ -0.08
Upk1aQ9D132 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms