Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd1Q9D0E3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Mir7654-201ENSMUST00000185082 70 ntBASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Gm5370-201ENSMUST00000187187 574 ntBASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Gm9229-201ENSMUST00000222777 126 ntBASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd1Q9D0E3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Gm18054-201ENSMUST00000207539 555 ntBASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.25■□□□□ 0.19
Lysmd1Q9D0E3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd1Q9D0E3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Gm7783-201ENSMUST00000204795 781 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd1Q9D0E3 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms