Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm6659-201ENSMUST00000174752 547 ntBASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Asic1-205ENSMUST00000228185 1818 ntBASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ssr1Q9CY50 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssr1Q9CY50 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Gm15794-201ENSMUST00000120182 631 ntBASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.65■□□□□ 0.26
Ssr1Q9CY50 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssr1Q9CY50 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ssr1Q9CY50 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms