Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nip7Q9CXK8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nip7Q9CXK8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.05■□□□□ 0.64
Nip7Q9CXK8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Gm2810-201ENSMUST00000118681 990 ntBASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nip7Q9CXK8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm13223-201ENSMUST00000118609 747 ntBASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm12428-201ENSMUST00000119844 727 ntBASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm15693-201ENSMUST00000120470 637 ntBASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm11543-201ENSMUST00000120758 370 ntBASIC19.03■□□□□ 0.64
Nip7Q9CXK8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nip7Q9CXK8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Gm27618-201ENSMUST00000183671 60 ntBASIC19.02■□□□□ 0.64
Nip7Q9CXK8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nip7Q9CXK8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nip7Q9CXK8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nip7Q9CXK8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nip7Q9CXK8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nip7Q9CXK8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Gm6415-201ENSMUST00000118488 348 ntBASIC19.01■□□□□ 0.63
Nip7Q9CXK8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Mir6977-201ENSMUST00000184960 64 ntBASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nip7Q9CXK8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Nip7Q9CXK8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19■□□□□ 0.63
Nip7Q9CXK8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nip7Q9CXK8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Gm15483-201ENSMUST00000120338 456 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Gm12151-201ENSMUST00000121374 290 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Gm18737-201ENSMUST00000173594 937 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Gm7556-201ENSMUST00000201178 1084 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19■□□□□ 0.63
Nip7Q9CXK8 CT010506.4-201ENSMUST00000225457 351 ntBASIC19■□□□□ 0.63
Nip7Q9CXK8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19■□□□□ 0.63
Nip7Q9CXK8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nip7Q9CXK8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms