Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb1Q9CQ70 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb1Q9CQ70 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afb1Q9CQ70 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2afb1Q9CQ70 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb1Q9CQ70 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb1Q9CQ70 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afb1Q9CQ70 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb1Q9CQ70 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb1Q9CQ70 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm14859-201ENSMUST00000117752 357 ntBASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm7506-201ENSMUST00000207758 815 ntBASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms