Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Gm6257-201ENSMUST00000163864 910 ntBASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ska1Q9CPV1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Mir7071-201ENSMUST00000184847 69 ntBASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ska1Q9CPV1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Gm23634-201ENSMUST00000175071 91 ntBASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Mir6404-201ENSMUST00000183699 94 ntBASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ska1Q9CPV1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Gm13836-201ENSMUST00000121159 501 ntBASIC14.49□□□□□ -0.09
Ska1Q9CPV1 AA414768-201ENSMUST00000121924 1257 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms