Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm13884-201ENSMUST00000118103 829 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm11452-201ENSMUST00000122376 690 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm28659-201ENSMUST00000188013 759 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm37444-201ENSMUST00000193605 439 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm5864-201ENSMUST00000202263 970 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Gm6376-201ENSMUST00000209407 580 ntBASIC15.23■□□□□ 0.03
Trim33Q99PP7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim33Q99PP7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.22■□□□□ 0.03
Trim33Q99PP7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim33Q99PP7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.21■□□□□ 0.03
Trim33Q99PP7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.21■□□□□ 0.03
Trim33Q99PP7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Gm19164-201ENSMUST00000210667 640 ntBASIC15.21■□□□□ 0.03
Trim33Q99PP7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.21■□□□□ 0.03
Trim33Q99PP7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim33Q99PP7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms