Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Ank2-226ENSMUST00000189368 339 ntBASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf111Q99ML9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf111Q99ML9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm15165-201ENSMUST00000118140 502 ntBASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Gm18669-201ENSMUST00000216049 778 ntBASIC14.88□□□□□ -0.03
Rnf111Q99ML9 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf111Q99ML9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms