Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-1Q99MA9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Gm6973-201ENSMUST00000117080 721 ntBASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-1Q99MA9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gm15693-201ENSMUST00000120470 637 ntBASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-1Q99MA9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-1Q99MA9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms