Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.28□□□□□ -0.12
Cdca3Q99M54 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdca3Q99M54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.27□□□□□ -0.13
Cdca3Q99M54 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdca3Q99M54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Gm7506-201ENSMUST00000207758 815 ntBASIC14.26□□□□□ -0.13
Cdca3Q99M54 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdca3Q99M54 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Gm14140-201ENSMUST00000119999 995 ntBASIC14.25□□□□□ -0.13
Cdca3Q99M54 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.25□□□□□ -0.13
Cdca3Q99M54 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdca3Q99M54 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdca3Q99M54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdca3Q99M54 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdca3Q99M54 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdca3Q99M54 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdca3Q99M54 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms