Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RtcbQ99LF4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Gm27680-201ENSMUST00000184192 160 ntBASIC18.85■□□□□ 0.61
RtcbQ99LF4 Gm27838-201ENSMUST00000184829 128 ntBASIC18.85■□□□□ 0.61
RtcbQ99LF4 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.85■□□□□ 0.61
RtcbQ99LF4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RtcbQ99LF4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.84■□□□□ 0.61
RtcbQ99LF4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.84■□□□□ 0.61
RtcbQ99LF4 Gm9794-201ENSMUST00000202370 423 ntBASIC18.84■□□□□ 0.61
RtcbQ99LF4 Gm7775-201ENSMUST00000218871 853 ntBASIC18.84■□□□□ 0.61
RtcbQ99LF4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.84■□□□□ 0.61
RtcbQ99LF4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RtcbQ99LF4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RtcbQ99LF4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RtcbQ99LF4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RtcbQ99LF4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RtcbQ99LF4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RtcbQ99LF4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Gm27533-201ENSMUST00000183800 152 ntBASIC18.83■□□□□ 0.6
RtcbQ99LF4 Gm44344-201ENSMUST00000200287 129 ntBASIC18.83■□□□□ 0.6
RtcbQ99LF4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RtcbQ99LF4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RtcbQ99LF4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms