Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1aQ921W0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1aQ921W0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1aQ921W0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1aQ921W0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1aQ921W0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp1aQ921W0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.56□□□□□ -0.24
Chmp1aQ921W0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp1aQ921W0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Gm10812-201ENSMUST00000099864 546 ntBASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.55□□□□□ -0.24
Chmp1aQ921W0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms