Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.69■□□□□ 0.42
Smc1bQ920F6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 AA543401-201ENSMUST00000164248 1269 ntBASIC17.69■□□□□ 0.42
Smc1bQ920F6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Gm18622-201ENSMUST00000219361 595 ntBASIC17.69■□□□□ 0.42
Smc1bQ920F6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Gm27300-201ENSMUST00000184085 97 ntBASIC17.68■□□□□ 0.42
Smc1bQ920F6 Gm27335-201ENSMUST00000184758 97 ntBASIC17.68■□□□□ 0.42
Smc1bQ920F6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc1bQ920F6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Mir1895-201ENSMUST00000122615 79 ntBASIC17.67■□□□□ 0.42
Smc1bQ920F6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Gm45167-201ENSMUST00000208007 322 ntBASIC17.67■□□□□ 0.42
Smc1bQ920F6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc1bQ920F6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Smc1bQ920F6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Prob1-201ENSMUST00000097619 3021 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms