Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha11Q91Y19 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha11Q91Y19 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Gm10499-201ENSMUST00000174094 934 ntBASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha11Q91Y19 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha11Q91Y19 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms