Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb20Q91XZ9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm12372-201ENSMUST00000121654 768 ntBASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Gm38262-201ENSMUST00000194760 1382 ntBASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb20Q91XZ9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb20Q91XZ9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm13059-201ENSMUST00000119881 398 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm17983-201ENSMUST00000190766 594 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm44554-201ENSMUST00000208738 147 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm7439-201ENSMUST00000214053 835 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms