Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga11Q91XY8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Gm14722-201ENSMUST00000118943 689 ntBASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga11Q91XY8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.83□□□□□ -0.03
Pcdhga11Q91XY8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Gm25745-201ENSMUST00000174945 133 ntBASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Gm19164-201ENSMUST00000210667 640 ntBASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga11Q91XY8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms