Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Gm14494-201ENSMUST00000118786 435 ntBASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Gm11764-201ENSMUST00000120221 623 ntBASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ddx41Q91VN6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx41Q91VN6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.58■□□□□ 0.41
Ddx41Q91VN6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Gm2213-201ENSMUST00000197485 688 ntBASIC17.58■□□□□ 0.4
Ddx41Q91VN6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms