Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gm12644-201ENSMUST00000119935 606 ntBASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H1fooQ8VIK3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Gm8344-201ENSMUST00000119813 856 ntBASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H1fooQ8VIK3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Grk6-207ENSMUST00000225925 2769 ntBASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Gm8655-201ENSMUST00000221159 852 ntBASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H1fooQ8VIK3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms