Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Gm11434-201ENSMUST00000122379 629 ntBASIC16.28■□□□□ 0.2
TraipQ8VIG6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.28■□□□□ 0.2
TraipQ8VIG6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.28■□□□□ 0.2
TraipQ8VIG6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TraipQ8VIG6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Gm16026-204ENSMUST00000162652 683 ntBASIC16.27■□□□□ 0.2
TraipQ8VIG6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Gm5312-201ENSMUST00000203728 547 ntBASIC16.27■□□□□ 0.2
TraipQ8VIG6 Gm18057-201ENSMUST00000208220 503 ntBASIC16.27■□□□□ 0.2
TraipQ8VIG6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TraipQ8VIG6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TraipQ8VIG6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TraipQ8VIG6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC16.27■□□□□ 0.19
TraipQ8VIG6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
TraipQ8VIG6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm14701-201ENSMUST00000117156 348 ntBASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm11745-201ENSMUST00000121669 448 ntBASIC16.26■□□□□ 0.19
TraipQ8VIG6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm18889-201ENSMUST00000174284 929 ntBASIC16.26■□□□□ 0.19
TraipQ8VIG6 Mir6990-201ENSMUST00000183724 91 ntBASIC16.26■□□□□ 0.19
TraipQ8VIG6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TraipQ8VIG6 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.26■□□□□ 0.19
TraipQ8VIG6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.25■□□□□ 0.19
TraipQ8VIG6 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.25■□□□□ 0.19
TraipQ8VIG6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms