Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gm8344-201ENSMUST00000119813 856 ntBASIC15.89■□□□□ 0.13
Trim60Q8VI40 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim60Q8VI40 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.88■□□□□ 0.13
Trim60Q8VI40 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gm6659-201ENSMUST00000174752 547 ntBASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gm27742-201ENSMUST00000184667 60 ntBASIC15.88■□□□□ 0.13
Trim60Q8VI40 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.88■□□□□ 0.13
Trim60Q8VI40 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim60Q8VI40 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.87■□□□□ 0.13
Trim60Q8VI40 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.87■□□□□ 0.13
Trim60Q8VI40 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim60Q8VI40 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Gm15165-201ENSMUST00000118140 502 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms