Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpa1Q8VEE4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm12134-201ENSMUST00000122109 520 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm10052-201ENSMUST00000168019 960 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Mir6404-201ENSMUST00000183699 94 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm44430-201ENSMUST00000203376 995 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm7729-201ENSMUST00000050143 801 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Gm15823-201ENSMUST00000064305 670 ntBASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpa1Q8VEE4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Mir6982-201ENSMUST00000184354 68 ntBASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.48■□□□□ 0.07
Rpa1Q8VEE4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rpa1Q8VEE4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms