Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.41■□□□□ 0.06
Vps39Q8R5L3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps39Q8R5L3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps39Q8R5L3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Vps39Q8R5L3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps39Q8R5L3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Vps39Q8R5L3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms