Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Gm37055-201ENSMUST00000191866 133 ntBASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup35Q8R4R6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.53□□□□□ -0.4
Nup35Q8R4R6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup35Q8R4R6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup35Q8R4R6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Gm22240-201ENSMUST00000175225 82 ntBASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup35Q8R4R6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms