Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.08■□□□□ 0
Chrna3Q8R4G9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Gm11779-201ENSMUST00000118541 368 ntBASIC15.07■□□□□ 0
Chrna3Q8R4G9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Gm9727-201ENSMUST00000161387 555 ntBASIC15.07■□□□□ 0
Chrna3Q8R4G9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chrna3Q8R4G9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.06■□□□□ 0
Chrna3Q8R4G9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.06■□□□□ 0
Chrna3Q8R4G9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.06■□□□□ 0
Chrna3Q8R4G9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chrna3Q8R4G9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chrna3Q8R4G9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.05■□□□□ -0
Chrna3Q8R4G9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms