Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm44430-201ENSMUST00000203376 995 ntBASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm5417-201ENSMUST00000079706 384 ntBASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc58Q8R3Q6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc58Q8R3Q6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms