Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim2Q8R1G6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Gm10698-201ENSMUST00000182663 604 ntBASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim2Q8R1G6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim2Q8R1G6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Gm10653-202ENSMUST00000139570 835 ntBASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim2Q8R1G6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms