Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gm27628-201ENSMUST00000184911 107 ntBASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Gm9682-201ENSMUST00000197505 556 ntBASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a1Q8K4Z5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a1Q8K4Z5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a1Q8K4Z5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a1Q8K4Z5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a1Q8K4Z5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Gm45167-201ENSMUST00000208007 322 ntBASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3a1Q8K4Z5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms