Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cystm1Q8K353 Gm45605-201ENSMUST00000210265 4269 ntBASIC9.68□□□□□ -0.86
Cystm1Q8K353 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Fbxl12-205ENSMUST00000140702 1555 ntBASIC9.67□□□□□ -0.86
Cystm1Q8K353 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Gm27389-201ENSMUST00000183622 195 ntBASIC9.67□□□□□ -0.86
Cystm1Q8K353 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Gm7791-201ENSMUST00000219066 539 ntBASIC9.67□□□□□ -0.86
Cystm1Q8K353 AC120002.2-201ENSMUST00000220205 773 ntBASIC9.67□□□□□ -0.86
Cystm1Q8K353 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cystm1Q8K353 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cystm1Q8K353 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC9.66□□□□□ -0.86
Cystm1Q8K353 Ankra2-208ENSMUST00000226100 1476 ntBASIC9.66□□□□□ -0.86
Cystm1Q8K353 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC9.66□□□□□ -0.86
Cystm1Q8K353 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.66□□□□□ -0.86
Cystm1Q8K353 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC9.66□□□□□ -0.86
Cystm1Q8K353 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Gm30238-201ENSMUST00000195528 2603 ntBASIC9.66□□□□□ -0.86
Cystm1Q8K353 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cystm1Q8K353 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms