Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cchcr1Q8K2I2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cchcr1Q8K2I2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cchcr1Q8K2I2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Gm15358-201ENSMUST00000119249 520 ntBASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cchcr1Q8K2I2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cchcr1Q8K2I2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cchcr1Q8K2I2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gm8097-201ENSMUST00000117903 829 ntBASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gm12644-201ENSMUST00000119935 606 ntBASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms