Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm13015-201ENSMUST00000118674 204 ntBASIC17.3■□□□□ 0.36
Syne4Q8CII8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Gm25144-201ENSMUST00000179561 110 ntBASIC17.3■□□□□ 0.36
Syne4Q8CII8 Gm25352-201ENSMUST00000179815 110 ntBASIC17.3■□□□□ 0.36
Syne4Q8CII8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.29■□□□□ 0.36
Syne4Q8CII8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.29■□□□□ 0.36
Syne4Q8CII8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne4Q8CII8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.28■□□□□ 0.36
Syne4Q8CII8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.28■□□□□ 0.36
Syne4Q8CII8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne4Q8CII8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Gm28630-201ENSMUST00000187806 498 ntBASIC17.27■□□□□ 0.36
Syne4Q8CII8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne4Q8CII8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne4Q8CII8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne4Q8CII8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Gm7488-201ENSMUST00000117148 684 ntBASIC17.26■□□□□ 0.35
Syne4Q8CII8 Gm16215-201ENSMUST00000161990 637 ntBASIC17.26■□□□□ 0.35
Syne4Q8CII8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syne4Q8CII8 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.26■□□□□ 0.35
Syne4Q8CII8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne4Q8CII8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms