Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.12■□□□□ 0.01
Vps50Q8CI71 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps50Q8CI71 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.11■□□□□ 0.01
Vps50Q8CI71 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vps50Q8CI71 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.1■□□□□ 0.01
Vps50Q8CI71 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Vps50Q8CI71 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.09■□□□□ 0.01
Vps50Q8CI71 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps50Q8CI71 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms