Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rdh1Q8CGV4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rdh1Q8CGV4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rdh1Q8CGV4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm26308-201ENSMUST00000157768 69 ntBASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms