Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm24270-201ENSMUST00000102326 57 ntBASIC18.87■□□□□ 0.61
Smc4Q8CG47 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Gm24245-201ENSMUST00000157318 57 ntBASIC18.87■□□□□ 0.61
Smc4Q8CG47 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Smc4Q8CG47 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc4Q8CG47 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Gm2272-201ENSMUST00000194903 582 ntBASIC18.86■□□□□ 0.61
Smc4Q8CG47 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.86■□□□□ 0.61
Smc4Q8CG47 Gm45747-201ENSMUST00000212203 999 ntBASIC18.86■□□□□ 0.61
Smc4Q8CG47 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smc4Q8CG47 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.85■□□□□ 0.61
Smc4Q8CG47 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc4Q8CG47 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc4Q8CG47 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc4Q8CG47 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc4Q8CG47 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Gm15427-201ENSMUST00000117288 531 ntBASIC18.83■□□□□ 0.6
Smc4Q8CG47 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.83■□□□□ 0.6
Smc4Q8CG47 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Gm26308-201ENSMUST00000157768 69 ntBASIC18.83■□□□□ 0.6
Smc4Q8CG47 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms