Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.14■□□□□ 0.17
Q8CD60 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Q8CD60 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.13■□□□□ 0.17
Q8CD60 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.13■□□□□ 0.17
Q8CD60 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Q8CD60 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.13■□□□□ 0.17
Q8CD60 Mir5126-201ENSMUST00000175513 77 ntBASIC16.13■□□□□ 0.17
Q8CD60 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
Q8CD60 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Q8CD60 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Q8CD60 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q8CD60 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Q8CD60 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Q8CD60 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Gm13036-201ENSMUST00000117799 748 ntBASIC16.12■□□□□ 0.17
Q8CD60 Gm12350-201ENSMUST00000121208 462 ntBASIC16.12■□□□□ 0.17
Q8CD60 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Q8CD60 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.12■□□□□ 0.17
Q8CD60 Gm9682-201ENSMUST00000197505 556 ntBASIC16.12■□□□□ 0.17
Q8CD60 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.12■□□□□ 0.17
Q8CD60 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.12■□□□□ 0.17
Q8CD60 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q8CD60 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.11■□□□□ 0.17
Q8CD60 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Gm45167-201ENSMUST00000208007 322 ntBASIC16.11■□□□□ 0.17
Q8CD60 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Q8CD60 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Sybu-209ENSMUST00000228639 4113 ntBASIC16.11■□□□□ 0.17
Q8CD60 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Q8CD60 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q8CD60 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Q8CD60 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Q8CD60 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.1■□□□□ 0.17
Q8CD60 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms