Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa4Q8CA71 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Shisa4Q8CA71 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa4Q8CA71 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa4Q8CA71 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa4Q8CA71 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa4Q8CA71 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Gm12008-201ENSMUST00000117791 755 ntBASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Gm44492-201ENSMUST00000197012 141 ntBASIC17.75■□□□□ 0.43
Shisa4Q8CA71 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa4Q8CA71 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Gm9385-201ENSMUST00000117563 472 ntBASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa4Q8CA71 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.73■□□□□ 0.43
Shisa4Q8CA71 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.73■□□□□ 0.43
Shisa4Q8CA71 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Gm20553-201ENSMUST00000204205 844 ntBASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms