Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a6Q8C6K9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a6Q8C6K9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gm18737-201ENSMUST00000173594 937 ntBASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a6Q8C6K9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm44855-201ENSMUST00000205725 362 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms