Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Eri3Q8C460 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.6□□□□□ -0.07
Eri3Q8C460 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Gm6550-201ENSMUST00000187574 993 ntBASIC14.6□□□□□ -0.07
Eri3Q8C460 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.6□□□□□ -0.07
Eri3Q8C460 Gm18195-201ENSMUST00000207604 706 ntBASIC14.6□□□□□ -0.07
Eri3Q8C460 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Eri3Q8C460 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.6□□□□□ -0.07
Eri3Q8C460 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Eri3Q8C460 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Eri3Q8C460 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Eri3Q8C460 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Eri3Q8C460 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.59□□□□□ -0.07
Eri3Q8C460 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Eri3Q8C460 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Eri3Q8C460 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Eri3Q8C460 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Eri3Q8C460 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Eri3Q8C460 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.58□□□□□ -0.08
Eri3Q8C460 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.58□□□□□ -0.08
Eri3Q8C460 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Eri3Q8C460 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Eri3Q8C460 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Eri3Q8C460 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.57□□□□□ -0.08
Eri3Q8C460 Gm37153-201ENSMUST00000193637 231 ntBASIC14.57□□□□□ -0.08
Eri3Q8C460 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.57□□□□□ -0.08
Eri3Q8C460 Mzt1-203ENSMUST00000227948 952 ntBASIC14.57□□□□□ -0.08
Eri3Q8C460 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Eri3Q8C460 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms