Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tsen54Q8C2A2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Gm7977-201ENSMUST00000193787 748 ntBASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tsen54Q8C2A2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Gm21559-201ENSMUST00000220638 855 ntBASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Gm8587-201ENSMUST00000076538 843 ntBASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tsen54Q8C2A2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms