Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ppp4r4Q8C0Y0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.53■□□□□ 0.08
Ppp4r4Q8C0Y0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ppp4r4Q8C0Y0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ppp4r4Q8C0Y0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms