Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim35Q8C006 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim35Q8C006 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim35Q8C006 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim35Q8C006 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim35Q8C006 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim35Q8C006 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim35Q8C006 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim35Q8C006 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm14746-201ENSMUST00000120309 741 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm11950-201ENSMUST00000121615 838 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm17063-201ENSMUST00000168135 456 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trim35Q8C006 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim35Q8C006 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim35Q8C006 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.21■□□□□ 0.19
Trim35Q8C006 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim35Q8C006 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim35Q8C006 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim35Q8C006 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm12584-201ENSMUST00000117109 1105 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm14859-201ENSMUST00000117752 357 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm15258-201ENSMUST00000153801 741 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm4540-201ENSMUST00000170669 429 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm43491-201ENSMUST00000197133 784 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm45276-201ENSMUST00000209549 1086 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Gm18115-201ENSMUST00000221209 621 ntBASIC16.2■□□□□ 0.18
Trim35Q8C006 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim35Q8C006 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim35Q8C006 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.19■□□□□ 0.18
Trim35Q8C006 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Trim35Q8C006 Gm7284-201ENSMUST00000131667 944 ntBASIC16.19■□□□□ 0.18
Trim35Q8C006 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trim35Q8C006 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim35Q8C006 Gm27704-201ENSMUST00000185094 107 ntBASIC16.19■□□□□ 0.18
Trim35Q8C006 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim35Q8C006 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim35Q8C006 AC122305.2-201ENSMUST00000215148 834 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms